End-to-end antibody engineering pipeline from sequence numbering to validated candidate panels via SciMiner tools.
by sciminer29 installs6 stars
Publisher
Skills by sciminer
19 published skills, 314 installs in total.
Run protein-ligand docking through SciMiner with six engines, pocket detection, and side-by-side comparison.
by sciminer22 installs3 stars
Multi-region pharma intelligence that pulls regulatory, trial, patent, and biomedical data into source-cited answers.
by sciminer18 installs5 stars
Binding-site and pocket prediction workflows using P2Rank, AF2BIND, and fpocket through SciMiner.
by sciminer22 installs3 stars
Virtual screening workflows for open and proprietary chemical libraries, including transformer-based screening and docking-based screening through SciMiner.
by sciminer22 installs3 stars
Protein, peptide, antibody, nanobody, binder, enzyme, and sequence design workflows using Boltzgen, RFdiffusion, RFdiffusion2, RFdiffusion3, ProteinMPNN, Lig...
by sciminer32 installs8 stars
Optical chemical structure recognition workflow for extracting molecule structures and names from images through SciMiner.
by sciminer22 installs3 stars
ADMET and pharmacokinetic/pharmacodynamic property prediction workflows using ADMET Predictor, AOMP, OBA, Graph-pKa, DeepEsol, and Molecular Descriptors thro...
by sciminer27 installs6 stars
Peptide design, docking, and peptide property analysis tools exposed through SciMiner.
by sciminer27 installs6 stars
Biomolecular structure prediction tools for Chai-1, Boltz-2, and AlphaFold3 via SciMiner APIs.
by sciminer27 installs6 stars
Synthesis evaluation workflows combining SynFormer-ED, Retrosynthesis Planner, and SAScore through SciMiner.
by sciminer24 installs3 stars
Small-molecule generation workflows combining REINVENT4, PocketXMol, fpocket, and Gnina Score through SciMiner.
by sciminer24 installs2 stars
Discover a user-specified SciMiner tool from the published API-doc index, read its Markdown description, and invoke it through the SciMiner internal API.
by sciminer8 installs2 stars
Relative binding free-energy and activity-label prediction workflows using PBCNet 2.0 on SciMiner, with Gnina docking and PDB/database retrieval to complete...
by sciminer5 installs1 stars
General life-sciences research copilot bundling 50 modular sub-skills across human genetics, variant interpretation, functional genomics, expression, pathway...
by sciminer5 installs1 stars
Build evidence-graded compound–target–disease network-pharmacology hypotheses for natural products, herbal medicines, formulae, and small molecules using live SciMiner tools plus public life-science evidence. Use when an agent must curate compounds, predict or verify targets, prioritize disease-rele
by sciminer
Structure-activity relationship analysis workflows using SciMiner's MCS-based and scaffold-based SAR APIs for file or inline table inputs, plus an AlphaFold3-based binding-mode prediction workflow for target-aware SAR.
by sciminer
Download, search, and analyze Patent-Mol-Wiki biomedical-patent packages. Use when users ask what happened in a recent patent period, need portfolio or trend statistics from wiki index.md files, ask whether a target, disease, modality, organization, or patent is present, need charts of patent distri
by sciminer
Produce current, evidence-graded pharmaceutical and biotechnology analysis at the company, platform, pipeline, asset, indication, trial, competitive-landscape, catalyst, risk, and valuation levels. Use for biopharma diligence, investment-research-style reports, pipeline reviews, target or mechanism
by sciminer
About Ottermind skills
Every published skill from sciminer. Following a publisher whose work already fits how you operate is often faster than evaluating individual skills one at a time.
Skills cover the full range of what an Ottermind agent does: building editable PowerPoint decks, generating product and brand images, writing and running code on a machine you connect, producing video from a script or a still, and cleaning and analysing spreadsheet data. A skill is what turns a general model into something that handles your specific version of one of those jobs the same way every time.
A skill is a plain Markdown file with a short frontmatter header, which means you can read exactly what it will do before running it, edit it to match your own conventions, and share it with colleagues. Once a skill produces the result you wanted, it can be attached to an agent or scheduled as an automation so the same work happens again without anyone rewriting the prompt.
- What is an Ottermind skill?
- A reusable instruction package written in Markdown. It gives an agent the context, steps, and constraints for one kind of task, so results stay consistent instead of depending on how well you phrased the prompt that day.
- How do I install and use a skill?
- Open any skill's detail page, read the full document, and install it into your workspace. From then on the agent can use it automatically when the task matches, or you can invoke it by name.
- Can I create my own skill?
- Yes. A skill is a Markdown file with frontmatter naming it and describing when it should be used. If you have a workflow you keep re-explaining to an agent, writing it down once as a skill is usually the shortest path to making it repeatable.
- Do skills cost extra?
- Browsing and installing skills from this library does not cost anything on its own. Running one consumes the same credits as any other agent task, depending on the model you choose and how much work the task involves.